Welcome to the Optibrium Community





Forgot login?
Register

Videos

Search


R-group Clipping

Friday, 01 June 2018 14:07
E-mail Print PDF
Matt Segall

StarDrop's R-group clipping tool enables you to quickly transform chemical building blocks into their corresponding substituents. These can be immediately used to enumerate virtual libraries in StarDrop’s Nova module and explore new design hypotheses. This short video show you how...

To hear the narration, please increase your speaker volume.


R-group Analysis

Friday, 01 June 2018 13:53
E-mail Print PDF
Matt Segall

StarDrop's R-group analysis makes it quick and easy to explore the variation of properties by the substituents within a chemical series. This video shows how to perform an R-group decomposition and create SAR plots.

The next video in this short series, illustrates how to create information-rich SAR plots.

To hear the narration, please increase your speaker volume.


Data Visualisation Introduction

Thursday, 24 May 2018 14:54
E-mail Print PDF
Matt Segall

This short video gives an overview of StarDrop's rich data visualisation capabilities. The videos in the following series introduce how to quickly produce publication-quality charts and interactively explore your data.

The next video in the series shows you how to get started by creating a chart.

To hear the narration, please increase your speaker volume.


Creating a Chart

Thursday, 24 May 2018 14:51
E-mail Print PDF
Matt Segall

This short video introduces how to use the visualisation area in StarDrop to quickly create a chart from your data

The following video illustrates how to format your chart to represent more dimensions of data by colour, size, symbol, transparency...

To hear the narration, please increase your speaker volume.


Formatting your Chart

Thursday, 24 May 2018 14:48
E-mail Print PDF
Matt Segall

This video demonstrates how to format your charts, using the properties in your data set, by colour, size, symbol, transparency...

The next video shows the many ways you can interact with your charts to explore your data

To hear the narration, please increase your speaker volume.


Interacting with your Chart

Thursday, 24 May 2018 14:43
E-mail Print PDF
Matt Segall

In this quick video, we show the many ways you can interact with your chart to show exactly the data you wish and link visualisations with your data sets.

The next video in the series illustrates how to create a dashboard with multiple interactive plots, to show an overview of your project at a glance

To hear the narration, please increase your speaker volume.


Creating a Dashboard

Thursday, 24 May 2018 14:39
E-mail Print PDF
Matt Segall

Here we'll see how to create a 'dashboard' containing multiple interactive charts, giving an instant overview of your project data.

Follow the link to the next video in the series to learn how to edit your chart's axes and title to show the data exactly how you want.

To hear the narration, please increase your speaker volume.


Editing Chart Axes and Title

Thursday, 24 May 2018 14:33
E-mail Print PDF
Matt Segall

Watch this video to see how you can edit the title of your chart and its axes, to precisely define their position, range, tick marks and labels.

Next we'll explore how you can annotate your chart with labels to display structures and detailed data on key compounds.

To hear the narration, please increase your speaker volume.


Annotating your Chart

Thursday, 24 May 2018 14:31
E-mail Print PDF
Matt Segall

You can add labels to your charts showing structure and data for key compounds or display your comments. Watch this quick video to see how...

Next well explore the many ways to further customise you chart, for example by displaying regression lines, setting fonts and colours for your text, or adding a grid.

To hear the narration, please increase your speaker volume.


Customising your Chart

Thursday, 24 May 2018 14:29
E-mail Print PDF
Matt Segall

To see some of the many ways you can customise your chart, by setting fonts and colours or adding grids and lines, watch this short video.

Once you've created the perfect chart, you'll want to copy it into your presentation or report. Watch the next video to see how.

To hear the narration, please increase your speaker volume.


Copying or Printing your Charts

Thursday, 24 May 2018 14:25
E-mail Print PDF
Matt Segall

In this video we show how easy it is to copy your charts directly into your presentations and reports or print them directly from StarDrop.

Moving on to more advanced visualisation techniques, the next video in the series shows how to create a trellised chart.

To hear the narration, please increase your speaker volume.


Trellising

Thursday, 24 May 2018 14:24
E-mail Print PDF
Matt Segall

A trellis enables you to compare the same chart for multiple categories of compound. This video shows you how, with just a few clicks.

Next we'll see how to add multiple series to a single chart to show multiple trends or relationships in a single view.

To hear the narration, please increase your speaker volume.


Adding Multiple Series to a Chart

Thursday, 24 May 2018 14:22
E-mail Print PDF
Matt Segall

You can create very information-rich visualisations by plotting multiple series on a single chart. In this video, we'll show you how...

The final video in the series discusses advanced chart formatting to create more complex format scales and highlight the most important property ranges.

To hear the narration, please increase your speaker volume.


Advanced Chart Formatting

Thursday, 24 May 2018 14:16
E-mail Print PDF
Matt Segall

Here we'll show how to tailor the format scales in your charts to highlight the property ranges in which you're most interested.

This is the last video in the visualisation series. We hope that you've found them useful and if you have any questions, please feel free to contact This e-mail address is being protected from spambots. You need JavaScript enabled to view it

To hear the narration, please increase your speaker volume.


Copy and Paste From StarDrop

Wednesday, 21 June 2017 09:14
E-mail Print PDF
Nick Foster

This short video illustrates how to you can simply copy selected compound identifiers, structures and any data directly from StarDrop and instantly create summary tables within Excel, Word, PowerPoint, etc. to present and share your results.

To hear the narration, please increase your speaker volume.


Importing Your Data into StarDrop

Friday, 09 June 2017 14:30
E-mail Print PDF
Matt Segall

This short video illustrates how to import your data into StarDrop from standard file formats, such as SD, SMILES, CSV and text files.

To hear the narration, please increase your speaker volume.


Introduction to Card View Designer

Friday, 24 June 2016 13:33
E-mail Print PDF
Nick Foster

This short video illustrates how to you can create Cards of any dimensions and lay out your data in a flexible format, along with your own titles and labels.

To hear the narration, please increase your speaker volume.


Flexible Substructure Searching

Friday, 17 June 2016 16:18
E-mail Print PDF
Matt Segall

This short video illustrates how to perform flexible substructure searches, including variable atoms, bonds and linkers using StarDrop's Find tool.

To hear the narration, please increase your speaker volume.


R-group Matched Pairs

Sunday, 22 November 2015 11:13
E-mail Print PDF
Matt Segall

This short video illustrates how to perform Matched Molecular Pair Analysis (MMPA) within a chemical series using StarDrop's R-group analysis tool

This is quite a specific form of MMPA and you may also be interested in the short video describing the general MMPA tool in StarDrop and how it can be used in combination with Card View.

To hear the narration, please increase your speaker volume.


Summary Analysis

Wednesday, 10 June 2015 00:00
E-mail Print PDF
Edmund Champness

StarDrop's Summary tool enables you to quickly see trends across the properties in your data sets. Take a look at this quick introduction...

To hear the narration, please increase your speaker volume.


Projects

Wednesday, 10 June 2015 00:00
E-mail Print PDF
Matt Segall

StarDrop project files enable you to save all of your data sets, visualisations, scoring profiles and templates in a single file making them easy to share and update. Take a look at this quick introduction...

To hear the narration, please increase your speaker volume.


Keeping Track of Selected Compounds

Wednesday, 10 June 2015 00:00
E-mail Print PDF
Edmund Champness

StarDrop's provides a number of ways to help you keep track of compounds you have selected. Take a look at these quick examples...

To hear the narration, please increase your speaker volume.


Getting Started in Card View

Tuesday, 21 October 2014 16:50
E-mail Print PDF
Matt Segall

This short video provides some hints and tips to help you to get started using StarDrop's Card View.

The next video in the series gives an introduction to tools for arranging cards in Card View.

To hear the narration, please increase your speaker volume.


Tools for Arranging Cards

Tuesday, 21 October 2014 16:49
E-mail Print PDF
Matt Segall

This short video gives an introduction to the tools provided by StarDrop's Card View that help you to arrange cards for your data set to identify clear patterns and structure-activity relationships.

The next video in the series gives an introduction to working with cards in Card View.

To hear the narration, please increase your speaker volume.


Working with Cards

Tuesday, 21 October 2014 16:48
E-mail Print PDF
Matt Segall

This short video gives an introduction to working with cards in StarDrop's Card View.

The next video in the series gives an introduction to working with stacks in Card View.

To hear the narration, please increase your speaker volume.


Working with Stacks

Tuesday, 21 October 2014 16:48
E-mail Print PDF
Matt Segall

This short video gives an introduction to working with stacks in StarDrop's Card View.

The next video in the series gives an introduction to working with links in Card View.

To hear the narration, please increase your speaker volume.


Working with Links

Tuesday, 21 October 2014 16:47
E-mail Print PDF
Matt Segall

This short video gives an introduction to working with links in StarDrop's Card View.

The next series of videos will give introductions to the Analysis tools in StarDrop that use cards, stacks and links to view and interact with their results, beginning with clustering.

To hear the narration, please increase your speaker volume.


Clustering

Tuesday, 21 October 2014 16:46
E-mail Print PDF
Matt Segall

This short video gives an introduction to the Clustering tool in StarDrop and how you can interact with the results in Card View.

The next video in the series describes the Activity Neighbourhood analysis tool in Card View. You may also be interested in another quick video that gives some tips on using clustering in combination with data visualisation in StarDrop.

To hear the narration, please increase your speaker volume.


Activity Landscapes

Tuesday, 21 October 2014 16:44
E-mail Print PDF
Matt Segall

This short video gives an introduction to the Activity Landscape analysis tool in StarDrop and how you can view and interact with the results in Card View.

The final video in the series describes the Matched Molecular Pair analysis tool in StarDrop.

To hear the narration, please increase your speaker volume.


Activity Neighbourhoods

Tuesday, 21 October 2014 16:43
E-mail Print PDF
Matt Segall

This short video gives an introduction to the Activity Neighbourhood analysis tool in StarDrop's Card View.

The next video in the series describes the Activity Landscape analysis tool in Card View.

To hear the narration, please increase your speaker volume.


Matched Molecular Pair Analysis

Tuesday, 21 October 2014 16:40
E-mail Print PDF
Matt Segall
This short video gives an introduction to the Matched Molecular Pair Analysis tool in StarDrop and how you can interact with the results in Card View.

If you are interested in Matched Molecular Pair Analysis, you may also like to see the tutorial on Matched Series Analysis, which goes beyond matched pairs by considering longer series of matched compound to make more relevant suggestions for substitutions in your chemical series.

To hear the narration, please increase your speaker volume.


Data Set Filtering

Tuesday, 18 February 2014 15:37
E-mail Print PDF
Matt Segall

This short movie illustrates how to use the data set filtering tool withing StarDrop to remove compounds with unwanted substructures or property values from your data set.

To hear the narration, please increase your speaker volume.


Information Rich SAR Plots

Thursday, 30 January 2014 00:00
E-mail Print PDF
Edmund Champness

This short video illustrates how to create information-rich SAR plots, including pie charts, histograms, scatter plots, radar plots, etc. to view property distributions by R-group in StarDrop's data visualisation area.

In the next video in this series on R-group analysis, you can find out how to perform an R-group matched pair analysis to look for substituents that have a consistently large impact on a property within a chemical series.

To hear the narration, please increase your speaker volume.


Clustering

Wednesday, 16 October 2013 20:21
E-mail Print PDF
Edmund Champness

The clustering tool makes it easy to identify groups of similar compounds within a dataset based on either their structure or properties. This demo shows how the cluster information can be used with StarDrop's chemical space and data visualisation to easily compare chemical series within a library and target the highest quality chemistries.

To hear the narration, please increase your speaker volume.


Merging Data Sets

Wednesday, 16 October 2013 20:06
E-mail Print PDF
Edmund Champness

Do you ever have trouble merging new experimental data back in with all the other information you have for your project? StarDrop makes this very easy. Take a look at this quick introduction...

To hear the narration, please increase your speaker volume.


Probabilistic Scoring

Wednesday, 16 October 2013 19:51
E-mail Print PDF
Edmund Champness

StarDrop's probabilistic scoring is a powerful multi-parameter optimisation (MPO) technique but we've made it really easy to use so that you can find out which compounds have the best balance of properties. Take a look...

To hear the narration, please increase your speaker volume.


Glowing Molecule

Wednesday, 16 October 2013 19:33
E-mail Print PDF
Edmund Champness

StarDrop's Glowing Molecule brings model predictions to life, showing you which parts of a molecule are having the biggest impact on its predicted properties. This quick introduction shows you how...

To hear the narration, please increase your speaker volume.






Latest Forums

Read more >

Popular Downloads

Read more >