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Latest Articles

Comparison of Metasite and StarDrop Prediction of CYP3A4, CYP2C9 and CYP2D6

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Young Shin and his colleagues at Genentech presented this poster at the ISSX North American Regional meeting in Baltimore, MD in October 2009.

COMPARISON OF METASITE AND STARDROP PREDICTION OF CYP3A4, CYP2C9 AND CYP2D6 V. Sashi Gopaul, Young Shin, Hoa Le, Matthew Baumgardner, Cornelis Hop and Cyrus Khojasteh Drug Metabolism & Pharmacokinetics, Genentec, Inc, South San Francisco, CA, USA, 94080

Metabolite identification studies play an important role in determining the sites of metabolic liability of new chemical entities (NCEs) in drug discovery. However, generating these complex and detailed studies in a highthroughput environment is often a challenge. Therefore, the use of in silico tools that can predict the sites of metabolism of an NCE could enhance the drug design process. In this study we compare the utility of MetaSite and Stardrop, two predictive softwares available for this purpose... 

Last Updated on Wednesday, 16 December 2009 11:31 Read more...
 

Beyond Profiling: Using ADMET Models to Guide Decisions

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This article was published in Chemistry & Biodiversity, Volume 6, Issue 11, Pages 2144 - 2151

Abstract

ADMET models, whether in silico or in vitro, are commonly used to ‘profile’ molecules, to identify potential liabilities or filter out molecules expected to have undesirable properties. While useful, this is the most basic application of such models. Here we will demonstrate how models may be used to go ‘beyond profiling’ to guide key decisions in drug discovery. For example, selection of chemical series to focus resources with confidence or design of improved molecules targeting structural modifications to improve key properties....

Last Updated on Wednesday, 16 December 2009 11:27 Read more...
 

Latest Forums

StarVue Announcement

You may have spotted our latest press release announcing the up-coming release of StarVue. So, what's this all about? StarVue will be a free desktop app allowing users to view compound structures and associated data in a convenient way. It will incorporate the table and molecule views from the latest version of StarDrop and allow simple sorting, merging and selection of compound data. Take at look...

Category: Optibrium News & Announcements
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Popular Downloads

Topological Polar Surface Area - Including S and P

In J. Med. Chem., 2000, 43 (20), pp 3714–3717, Ertl et al. propose the calculation of two polar surface area values, the first reports the PSA for Nitrogen and Oxygen atoms only, the second also includes Sulfur and Phosphorus in the calculation.

The default TPSA model in StarDrop is the first of these models, including only N and O. This was chosen based on feedback from users. However, we have also created a StarDrop model for the more general model for those who wish to use this definition. Instructions on how to download and install the model are available on the following pages, along with the model file itself...

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